ID | Title | Section/Topic | Authors | Keywords |
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701 | Characterization of ancient whole-genome duplications from genomic and transcriptomic data: a machine learning approach Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Sutherland, Brittany; Tiley, George; Barker, Michael. | |
519 | Characterization of Genes involved in Producing Anti-Cancer Compounds in the Euphorbia schimperiTranscriptome Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Alqahtani, Aldanah; Jansen, Robert. | |
558 | Canceled Characterization of three chloroplast genomes of Birthwort family (Aristolochiaceae) and insights into diverse genome structure and rearrangement in Asarum Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Gil, Hee-Young; Ha, Young-Ho; Choi, Kyung; Kim, Dong-Kap. | Aristolochiaceae Asarum Aristolochia IR expansion repetitive DNA sequences |
721 | Canceled Co-option and carnivory in the Caryophyllales Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Drummond, Chloe Pak; Bocklund, Kylie; Lan, Tianying; Tan, Qiao Wen; Fukushima, Kenji; Rajaraman, Sitaram; Salojärvi, Jarkko; Albert, Victor; Renner, Tanya. | carnivory comparative genomics Transcriptomics Caryophyllales |
654 | Comparative genomics of ecologically diverse Andropogoneae species Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Deb, Sontosh; Romay, Cinta; Rees, Evan; Song, Baoxing; LePak, Nick; Pasquet, Remy; Buckler, Edward; McKain, Michael; McKain, Michael. | Vossia Maize genomics polyploidy Synteny |
690 | Comparative phylogenomic and structural analyses of complete plastomes of the most basal lineage Proto-Araceae Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Kim, Seon-Hee; Maki, Masayuki; Lepschi, Brendan; Kim, Seung-Chul. | Comparative phylogenomics Araceae Proto-Araceae Gymnostachydoideae Orontioideae Intercontinental disjunct distribution plastome |
458 | Comparative Transcriptomics of Repeated Reticulate Evolution in the Genus Cuscuta (Convolvulaceae) Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Frangione, Erika; Stefanović, Saša. | Transcriptome hybrid Polyploid Next Generation Sequencing Cuscuta |
816 | Canceled Conserved alternative splicing across rapidly evolving taxa Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Catlin, Nathan; Wing, Rod A.; Barbazuk, W. Brad. | Alternative splicing Oryza rice splice splicing |
704 | Differential Gene Expression as a Tool for Assessing Homology among Extrafloral Nectaries in Passiflora L. (Passifloraceae) Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Maynord, Silas; Krosnick, Shawn; Hearn, David. | Homology Extrafloral Nectaries Passiflora Transcriptomics |
278 | Diverse Sex Chromosomes in the Salicaceae Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Olson, Matt; Sanderson, Brian; Hu, Nan; Guo, Minghao; Feng, Guanqiao; DiFazio, Stephen. | Sex Chromosomes Salicaceae Dioecy |
1011 | Elucidating evolution of specialized metabolism in the mint family (Lamiaceae) Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Godden, Grant; Soltis, Pamela; Soltis, Douglas; Consortium, Mint Evolutionary Genomics. | Lamiaceae specialized metabolism genomes transcriptomes Gene duplication polyploidy monoterpenes iridoids sesquiterpenes |
426 | Evaluating the genetic basis of morphological variation in the floral nectar spurs of Aquilegia Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Liu, Jasen; Ballerini, Evangeline S.; Hodges, Scott. | genetics floral evolution floral traits development aquilegia |
1054 | Canceled Evolutionary dynamics of long intergenic noncoding RNA: temporal shifts of diversification and conservation across the Angiosperms Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Adams, Keith. | genomics non-coding RNAs Genome Evolution Molecular Evolution Whole genome duplication polyploidy Gene Expression |
161 | Evolution of Resistance Genes in Wheat (Triticum aestivum L.) and its Relatives Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Purintun, Jordan; Andersen, Ethan; Neupane, Surendra; Nepal, Madhav. | Plant immunity Disease resistance NBS-LRRs Coiled coiled (CC) CNL, TNL and RNL |
499 | Exploring the evolutionary history of the CUP-SHAPED COTYLEDON (CUC) gene family in the honeysuckles (Lonicera, Caprifoliaceae) and relatives Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Lee, Aaron; Rahman-Vyas, Hiba; Walker, Joseph; Donoghue, Michael; Smith, Stephen; Howarth, Dianella; Clement, Wendy. | gene phylogeny Asterids genomics Dipsacales transcriptomes Genome skimming Gene duplication |
357 | Fluctuation in size and content of mitochondrial genomes across four subfamilies of Fabaceae Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Choi, In-Su; Schwarz, Erika; Ruhlman, Tracey; Jansen, Robert. | Legumes evolution mt DNA IGT HGT |
677 | Genomic consequences of UV sex chromosomes Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Carey, Sarah; McDaniel, Stuart. | moss Sex Chromosomes Ceratodon purpureus |
343 | Highly accelerated rates of genomic rearrangements and nucleotide substitutions in plastid genomes of Passiflora subgenus Decaloba Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Shrestha, Bikash; Weng, Mao-Lun; Theriot, Edward; Gilbert, Lawerence; Ruhlman, Tracey; Krosnick, Shawn; Jansen, Robert. | Passifloraceae IR expansion/contraction plastid-encoded RNA polymerase inversion substitution rate analyses |
162 | Identification and Characterization of Mitogen-Activated Protein Kinase Kinase Kinase (MKKK) Genes in Sunflower (Helianthus annuus L.) Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Neupane, Surendra; Schweitzer, Sara; Kaluwahandi, Shakila; Bush, Charles; DuBray, Candy; Nepal, Madhav. | Abiotic Stress Cellular signaling Protein kinase MAPKKK cascade Sunflower MAPKKKs |
201 | Identification of Conserved Regulatory Modules in Dry and Fleshy Fruit Development Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Rajewski, Alex; Maheepala, Dinusha; Henry, Ashley; Elkins, Kevan; Litt, Amy. | Solanaceae Tobacco Tomato Transcriptome Transcription factor evolution Fruit Development |
980 | In search of the regulatory basis of crassulacean acid metabolism (CAM): a comparative genomics approach in three species of Yucca L Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Field, Richard D; Heyduk, Karolina; Leebens-Mack, Jim. | genomics photosynthesis Gene Expression Chromatin Structure |
967 | Isolation and Characterization of some African Yam Bean (Sphenostylis sternocarpa Hochst ex. A. Rich Harms) fungal endophytes Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Kehinde, Iyabode; Oyekanmi, Joshua. | fungal endophyte African Yam Bean Internal Transcribed Spacer |
404 | Lost and Found: Return of the inverted repeat in the legume clade defined by its absence Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Ruhlman, Tracey A; Choi, In-Su; Jansen, Robert. | plastome recombination inverted repeat |
417 | Misconceptions about Plastome Organization and Evolution Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Jansen, Robert; Jansen, Robert; Ruhlman, Tracey; Goncalves, Deise. | plastome recombination transcription phylogenomics |
283 | Multiple Independent Whole Genome Duplication Events in the Brassicales Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Mabry, Makenzie; Brose, Julia M.; Blischak, Paul; Dismukes, Wade; Bottoms, Christopher; Edger, Patrick; Washburn, Jacob; An, Hong; McKain, Michael; McKain, Michael; Barker, Michael; Al-Shehbaz, Ihsan; Schranz, M. Eric; Pires, Joseph. | Brassicales Genome Evolution Transcriptomics phylogeny polyploidy |
361 | Multiple structural types of plastid genomes within a single individual Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Lee, Chaehee; Ruhlman, Tracey; Jansen, Robert. | plastome multiple genomic configuration Cyperaceae repetitive DNA sequences PacBio SMRT sequencing |
488 | New transcriptomic resources and orthologous nuclear markers for the species-rich flowering plant family Acanthaceae Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | De Morais, Erica Barroso; Schoenenberger, Juerg; Conti, Elena; Antonelli, Alexandre; Szoevenyi, Peter. | Acanthaceae Lamiales targeted markers transcriptomes phylogeny |
639 | Plastome evolution across the phylogenetic backbone of the parasitic plant genus Cuscuta (Convolvulaceae) Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Banerjee, Arjan; Stefanović, Saša. | Parasitic Plants Heterotrophy plastid plastome Cuscuta Convolvulaceae Dodders |
629 | Plastome sequencing of the last two lineages of parasitic plants: Lennoaceae and Krameriaceae Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Schneider, Adam; Braukmann, Thomas; Banerjee, Arjan; Stefanović, Saša. | Lennoaceae plastome Krameriaceae parasitic plant parasitic reduction syndrmoe Boraginales |
935 | Species level variation in Conserved Non-coding Sequences Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Yocca, Alan; Lu, Zefu; Schmitz, Bob; Edger, Patrick. | comparative genomics evolution Epigenetics CNS Genome Evolution Pangenomics |
530 | Statistically modeling preferentially gene retention after the paleopolyploidy events in the tribe Brassiceae Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Hao, Yue; Colle, Marivi; Edger, Patrick; Pires, Joseph; Conant, Gavin. | polyploidy biased fractionation Brassica |
829 | Structural organization of chloroplast genomes of five species of riverweeds (Podostemaceae) and comparative analysis in Malpighiales Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Bedoya, Ana Maria; Ruhfel, Brad; Philbrick, C.T.; Madrinan, Santiago; Bove, Claudia; Mesterházy, Attila; Olmstead, Richard. | chloroplast genome Podostemaceae Malpighiales |
522 | Survey of Viridiplantae for homospermidine synthase-like genes: multiple parallel origins at multiple phylogenetic depths Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Livshultz, Tatyana; Smith, Chelsea R.; Teisher, Jordan. | special metabolism alkaloids Gene duplication paralogy orthology parallel evolution gene trees |
671 | The first genome sequence for Penstemon (Plantaginaceae) Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Wolfe, Andi; Blischak, Paul. | Whole Genome Sequencing genome Penstemon Penstemon petiolatus genome Plantaginanceae |
771 | The genetic basis of hybrid novelty in monkeyflowers (Mimulus) Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Schlutius, Caroline; Zheng, Xingyu; Matthews, Melia; Cooley, Arielle; Puzey, Joshua. | hybrid novelty Mimulus petal lobe anthocyanin GWAS |
111 | The genetic basis of serpentine adaptation in Aquilegia eximia. Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Black, Danielle. | evolution serpentine population differentiation |
681 | The genome of the desiccation tolerant moss Syntrichia caninervisand its response to abiotic stress Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Silva, AndersoN; Fisher, Kirsten; Bei, Gao; Stark, Lloyd; Mishler, Brent; Zhang, Daoyuan; Oliver, Melvin. | syntrichia caninervis genome Desiccation Transcriptomics |
160 | Transcriptome sequencing for development and assessment of genic SSR marker in Ipomoea species Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Unamba, Chibuikem I.N.; Singh, Gagandeep; Singh, Pradeep; Seth, Romit; Agbagwa, Ikechukwu O; Sharma, Ram K. | Transcriptome SSR marker Ipomoea Next Generation Sequencing Sequencing |
811 | Using comparative genomics to uncover the secrets of the serpentine jewelflower: Caulanthus amplexicaulis Log in to add this item to your schedule | Comparative Genomics/Transcriptomics | Garza, Elyssa; Hawkins, Angela; Pepper, Alan. | genome serpentine Caulanthus Sequencing |